Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN03080610_02861 | Not Available | Negative | 3062985 - 3064184 | 45216.7 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03080610_02862 | Not Available | Positive | 3064512 - 3065843 | 48270.5 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN03080610_02863 | Not Available | Positive | 3065834 - 3067294 | 52027.9 |
| o-antigen ligase like membrane protein | SAMN03080610_02864 | Not Available | Negative | 3067347 - 3068804 | 51773.1 |
| capsular exopolysaccharide family | SAMN03080610_02865 | Not Available | Negative | 3068974 - 3070938 | 68670.8 |
| putative colanic acid biosysnthesis udp-glucose lipid carrier transferase | SAMN03080610_02866 | Not Available | Negative | 3070928 - 3071671 | 27122.0 |
| polysaccharide export outer membrane protein | SAMN03080610_02867 | Not Available | Positive | 3071828 - 3073066 | 45633.6 |
| amino acid adenylation domain-containing protein | SAMN03080610_02868 | Not Available | Positive | 3073133 - 3074866 | 61658.7 |
| thioesterase domain-containing protein | SAMN03080610_02869 | Not Available | Positive | 3074909 - 3076120 | 44552.9 |
| hypothetical protein | SAMN03080610_02870 | Not Available | Negative | 3076174 - 3077868 | 59495.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
