Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitt/taut family transport system atp-binding protein | SAMN03080610_02851 | Not Available | Negative | 3054166 - 3054942 | 28638.0 |
| nitt/taut family transport system permease protein | SAMN03080610_02852 | Not Available | Negative | 3054956 - 3055750 | 28439.8 |
| histidinol-phosphate aminotransferase | SAMN03080610_02853 | Not Available | Negative | 3055747 - 3056847 | 39656.5 |
| arylmalonate decarboxylase | SAMN03080610_02854 | Not Available | Negative | 3056844 - 3057572 | 25544.8 |
| protein of unknown function | SAMN03080610_02855 | Not Available | Negative | 3057557 - 3058588 | 35925.9 |
| ubid family decarboxylase | SAMN03080610_02856 | Not Available | Negative | 3058575 - 3059927 | 49400.2 |
| transcriptional regulator, iclr family | SAMN03080610_02857 | Not Available | Positive | 3060040 - 3060846 | 28587.4 |
| 4'-phosphopantetheinyl transferase | SAMN03080610_02858 | Not Available | Negative | 3060841 - 3061584 | 26932.4 |
| hypothetical protein | SAMN03080610_02859 | Not Available | Negative | 3061589 - 3061930 | 12283.0 |
| hypothetical protein | SAMN03080610_02860 | Not Available | Positive | 3062150 - 3062494 | 12849.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
