Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | SAMN03080610_02831 | Not Available | Positive | 3033483 - 3034619 | 40188.9 |
| mg2+ and co2+ transporter corb, contains duf21, cbs pair, and corc-hlyc domains | SAMN03080610_02832 | Not Available | Positive | 3034623 - 3035915 | 46712.8 |
| transcriptional regulator, bola protein family | SAMN03080610_02833 | Not Available | Negative | 3035946 - 3036221 | 10160.0 |
| dnaj domain-containing protein | SAMN03080610_02834 | Not Available | Positive | 3036296 - 3036922 | 23726.8 |
| cobaltochelatase cobs subunit | SAMN03080610_02835 | Not Available | Positive | 3036986 - 3037972 | 36731.6 |
| cobaltochelatase cobt subunit | SAMN03080610_02836 | Not Available | Positive | 3037988 - 3039874 | 70336.1 |
| hypothetical protein | SAMN03080610_02837 | Not Available | Negative | 3039958 - 3040566 | 21660.8 |
| large subunit ribosomal protein l28 | SAMN03080610_02838 | Not Available | Negative | 3040625 - 3040927 | 10713.1 |
| protein of unknown function | SAMN03080610_02839 | Not Available | Positive | 3041161 - 3041979 | 29902.0 |
| atp-dependent rna helicase supv3l1/suv3 | SAMN03080610_02840 | Not Available | Positive | 3042428 - 3045655 | 116658.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
