Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03080610_02821 | Not Available | Positive | 3025901 - 3026128 | 8056.6 |
| hypothetical protein | SAMN03080610_02822 | Not Available | Positive | 3026121 - 3026327 | 7227.22 |
| acetyltransferase (gnat) domain-containing protein | SAMN03080610_02823 | Not Available | Positive | 3026487 - 3026999 | 18910.7 |
| transcriptional regulator, tetr family | SAMN03080610_02824 | Not Available | Positive | 3027192 - 3027734 | 19273.2 |
| predicted arabinose efflux permease, mfs family | SAMN03080610_02825 | Not Available | Positive | 3027731 - 3028897 | 38313.1 |
| murein l,d-transpeptidase yafk | SAMN03080610_02826 | Not Available | Negative | 3029173 - 3030375 | 43940.6 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | SAMN03080610_02827 | Not Available | Negative | 3030595 - 3031551 | 34394.2 |
| integrase/recombinase xerd | SAMN03080610_02828 | Not Available | Negative | 3031667 - 3032545 | 31811.6 |
| hypothetical protein | SAMN03080610_02829 | Not Available | Negative | 3032629 - 3032772 | 5244.69 |
| shikimate kinase | SAMN03080610_02830 | Not Available | Positive | 3032884 - 3033486 | 21991.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
