Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein sco1/2 | SAMN03080610_02791 | Not Available | Positive | 2994911 - 2995507 | 21264.2 |
| hypothetical protein | SAMN03080610_02792 | Not Available | Positive | 2995592 - 2995750 | 5362.8 |
| hypothetical protein | SAMN03080610_02793 | Not Available | Positive | 2995873 - 2996229 | 13187.6 |
| lytic murein transglycosylase | SAMN03080610_02794 | Not Available | Negative | 2996267 - 2997094 | 29875.6 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN03080610_02795 | Not Available | Negative | 2997351 - 2999990 | 96321.3 |
| hypothetical protein | SAMN03080610_02796 | Not Available | Positive | 3000293 - 3001057 | 27830.2 |
| protein of unknown function | SAMN03080610_02797 | Not Available | Negative | 3001197 - 3002156 | 35292.9 |
| release factor glutamine methyltransferase | SAMN03080610_02798 | Not Available | Negative | 3002408 - 3003304 | 31555.8 |
| bacterial peptide chain release factor 1 (brf-1) | SAMN03080610_02799 | Not Available | Negative | 3003363 - 3004442 | 39596.9 |
| phosphotransferase system, enzyme i, ptsp | SAMN03080610_02800 | Not Available | Negative | 3004467 - 3006734 | 83000.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
