Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase-1/2/3 large subunit | SAMN03080610_02737 | Not Available | Negative | 2940884 - 2942512 | 56868.5 |
| arginine:pyruvate transaminase | SAMN03080610_02738 | Not Available | Negative | 2942509 - 2943708 | 43469.9 |
| transcriptional regulator, tetr family | SAMN03080610_02739 | Not Available | Negative | 2943754 - 2944497 | 26701.9 |
| polar amino acid transport system atp-binding protein | SAMN03080610_02740 | Not Available | Positive | 2944750 - 2945568 | 29510.5 |
| polar amino acid transport system substrate-binding protein | SAMN03080610_02741 | Not Available | Positive | 2945629 - 2946402 | 27845.0 |
| polar amino acid transport system permease protein | SAMN03080610_02742 | Not Available | Positive | 2946623 - 2947282 | 23125.2 |
| polar amino acid transport system permease protein | SAMN03080610_02743 | Not Available | Positive | 2947279 - 2948124 | 31443.2 |
| hippurate hydrolase | SAMN03080610_02744 | Not Available | Positive | 2948125 - 2949294 | 42191.1 |
| aldehyde dehydrogenase (nad+) | SAMN03080610_02745 | Not Available | Positive | 2949323 - 2950765 | 51341.1 |
| nadh dehydrogenase | SAMN03080610_02746 | Not Available | Negative | 2950836 - 2951795 | 34112.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
