Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multiple sugar transport system permease protein | SAMN03080610_02727 | Not Available | Positive | 2928435 - 2929280 | 30217.7 |
| nicotinamidase/pyrazinamidase | SAMN03080610_02728 | Not Available | Positive | 2929404 - 2930036 | 22595.6 |
| dna-binding transcriptional regulator, lrp family | SAMN03080610_02729 | Not Available | Negative | 2930069 - 2930641 | 21691.8 |
| alanine dehydrogenase | SAMN03080610_02730 | Not Available | Positive | 2930683 - 2931798 | 38143.0 |
| hypothetical protein | SAMN03080610_02731 | Not Available | Negative | 2932000 - 2932233 | 8433.95 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN03080610_02732 | Not Available | Positive | 2932758 - 2935496 | 92707.1 |
| serralysin | SAMN03080610_02733 | Not Available | Negative | 2935601 - 2937382 | 60340.9 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN03080610_02734 | Not Available | Positive | 2937699 - 2938745 | 38411.0 |
| putative spermidine/putrescine transport system permease protein | SAMN03080610_02735 | Not Available | Positive | 2938756 - 2940009 | 46401.5 |
| putative spermidine/putrescine transport system permease protein | SAMN03080610_02736 | Not Available | Positive | 2940006 - 2940824 | 29314.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
