Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter solute receptor, taxi family | SAMN03080610_00212 | Not Available | Positive | 233905 - 234876 | 34347.7 |
| trap transporter, 4tm/12tm fusion protein | SAMN03080610_00213 | Not Available | Positive | 234927 - 236696 | 61037.7 |
| protein of unknown function | SAMN03080610_00214 | Not Available | Positive | 236693 - 237625 | 32507.9 |
| ba14k-like protein | SAMN03080610_00215 | Not Available | Negative | 237712 - 238143 | 16211.5 |
| acetyl-coa c-acetyltransferase | SAMN03080610_00216 | Not Available | Negative | 238294 - 239484 | 41219.4 |
| acetyl-coa synthetase | SAMN03080610_00217 | Not Available | Negative | 239601 - 241277 | 60756.0 |
| arac-type dna-binding protein | SAMN03080610_00218 | Not Available | Positive | 241437 - 242465 | 38534.7 |
| osmoprotectant transport system substrate-binding protein | SAMN03080610_00219 | Not Available | Positive | 242693 - 243601 | 32084.6 |
| osmoprotectant transport system permease protein | SAMN03080610_00220 | Not Available | Positive | 243612 - 244760 | 38884.1 |
| osmoprotectant transport system atp-binding protein | SAMN03080610_00221 | Not Available | Positive | 244757 - 245695 | 34212.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
