Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMN03080610_02635 | Not Available | Positive | 2820059 - 2820502 | 16182.6 |
| thiamine transport system substrate-binding protein | SAMN03080610_02637 | Not Available | Positive | 2821104 - 2822180 | 38474.4 |
| thiamine transport system permease protein | SAMN03080610_02638 | Not Available | Positive | 2822156 - 2823814 | 58069.6 |
| thiamine transport system atp-binding protein | SAMN03080610_02639 | Not Available | Positive | 2823811 - 2824539 | 26085.8 |
| gaf domain-containing protein | SAMN03080610_02640 | Not Available | Positive | 2824890 - 2825912 | 35738.3 |
| aldehyde dehydrogenase | SAMN03080610_02641 | Not Available | Positive | 2826005 - 2827525 | 55965.8 |
| alcohol dehydrogenase, propanol-preferring | SAMN03080610_02642 | Not Available | Positive | 2827604 - 2828635 | 35997.2 |
| hypothetical protein | SAMN03080610_02643 | Not Available | Positive | 2828659 - 2829057 | 14546.5 |
| glycine/d-amino acid oxidase | SAMN03080610_02644 | Not Available | Negative | 2829118 - 2830410 | 45659.2 |
| ornithine cyclodeaminase | SAMN03080610_02645 | Not Available | Negative | 2830573 - 2831712 | 41482.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
