Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted o-methyltransferase yrrm | SAMN03080610_02625 | Not Available | Positive | 2808126 - 2808782 | 24066.8 |
| iron complex transport system substrate-binding protein | SAMN03080610_02626 | Not Available | Positive | 2808779 - 2809879 | 40251.6 |
| isochorismate synthase | SAMN03080610_02627 | Not Available | Positive | 2809949 - 2811160 | 42389.6 |
| 2,3-dihydroxybenzoate-amp ligase | SAMN03080610_02628 | Not Available | Positive | 2811160 - 2812791 | 59688.1 |
| bifunctional isochorismate lyase / aryl carrier protein | SAMN03080610_02629 | Not Available | Positive | 2812791 - 2813447 | 24150.1 |
| aryl carrier domain-containing protein | SAMN03080610_02630 | Not Available | Positive | 2813444 - 2813701 | 9701.48 |
| enterobactin synthetase component f | SAMN03080610_02631 | Not Available | Positive | 2813698 - 2817624 | 142922.0 |
| 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | SAMN03080610_02632 | Not Available | Positive | 2817621 - 2818388 | 26203.5 |
| hypothetical protein | SAMN03080610_02633 | Not Available | Positive | 2818385 - 2819257 | 32360.5 |
| hypothetical protein | SAMN03080610_02634 | Not Available | Positive | 2819615 - 2819974 | 13943.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
