Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polymer biosynthesis protein, wecb/taga/cpsf family | SAMN03080610_02615 | Not Available | Negative | 2794277 - 2795623 | 49900.2 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN03080610_02616 | Not Available | Positive | 2795988 - 2796602 | 22091.7 |
| uncharacterized protein involved in exopolysaccharide biosynthesis | SAMN03080610_02617 | Not Available | Positive | 2796762 - 2798342 | 56776.6 |
| hypothetical protein | SAMN03080610_02618 | Not Available | Positive | 2798317 - 2799612 | 47639.4 |
| pas fold-containing protein | SAMN03080610_02619 | Not Available | Positive | 2799760 - 2801469 | 61813.9 |
| crispr-associated endonuclease csn1 | SAMN03080610_02620 | Not Available | Negative | 2801656 - 2802051 | 14416.0 |
| iron complex transport system atp-binding protein | SAMN03080610_02621 | Not Available | Negative | 2802859 - 2803632 | 27668.8 |
| iron complex transport system permease protein | SAMN03080610_02622 | Not Available | Negative | 2803626 - 2804657 | 35991.6 |
| arac-type dna-binding protein | SAMN03080610_02623 | Not Available | Negative | 2804711 - 2805715 | 37313.6 |
| iron complex outermembrane recepter protein | SAMN03080610_02624 | Not Available | Positive | 2805908 - 2808064 | 78116.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
