Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN03080610_02605 | Not Available | Positive | 2782004 - 2783434 | 54003.8 |
| hpt domain-containing protein | SAMN03080610_02606 | Not Available | Negative | 2783484 - 2783777 | 10467.4 |
| hypothetical protein | SAMN03080610_02607 | Not Available | Positive | 2784011 - 2784571 | 20220.3 |
| pas domain s-box-containing protein | SAMN03080610_02608 | Not Available | Positive | 2784589 - 2787207 | 95062.2 |
| protein involved in polysaccharide export, contains slbb domain of the beta-grasp fold | SAMN03080610_02609 | Not Available | Negative | 2787266 - 2788501 | 43928.2 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN03080610_02610 | Not Available | Positive | 2788737 - 2790014 | 44302.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03080610_02611 | Not Available | Positive | 2790016 - 2790960 | 34879.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03080610_02612 | Not Available | Positive | 2790993 - 2791991 | 37207.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03080610_02613 | Not Available | Positive | 2792016 - 2793032 | 36958.4 |
| vanz like family protein | SAMN03080610_02614 | Not Available | Negative | 2793236 - 2793607 | 13191.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
