Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein | SAMN03080610_02595 | Not Available | Negative | 2769868 - 2770359 | 17985.4 |
| chey chemotaxis protein or a chey-like rec (receiver) domain | SAMN03080610_02596 | Not Available | Positive | 2770706 - 2771488 | 28522.9 |
| transposase dde domain-containing protein | SAMN03080610_02597 | Not Available | Negative | 2771854 - 2772079 | 8320.12 |
| transposase | SAMN03080610_02598 | Not Available | Positive | 2772080 - 2772420 | 12374.9 |
| pas domain s-box-containing protein | SAMN03080610_02599 | Not Available | Negative | 2772417 - 2776304 | 142434.0 |
| response regulator receiver domain-containing protein | SAMN03080610_02600 | Not Available | Positive | 2776765 - 2777151 | 13883.7 |
| hypothetical protein | SAMN03080610_02601 | Not Available | Positive | 2777216 - 2778787 | 56461.4 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN03080610_02602 | Not Available | Positive | 2778784 - 2779173 | 14452.7 |
| outer membrane protein, yaio family | SAMN03080610_02603 | Not Available | Positive | 2779173 - 2780966 | 65464.6 |
| heat repeat | SAMN03080610_02604 | Not Available | Positive | 2780970 - 2782007 | 37686.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
