Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03080610_00202 | Not Available | Negative | 223303 - 223971 | 24353.7 |
| radical sam additional 4fe4s-binding spasm domain-containing protein | SAMN03080610_00203 | Not Available | Negative | 224011 - 225417 | 51617.8 |
| hypothetical protein | SAMN03080610_00204 | Not Available | Negative | 225525 - 225710 | 6690.93 |
| uncharacterized conserved protein | SAMN03080610_00205 | Not Available | Negative | 225996 - 226589 | 21335.6 |
| hypothetical protein | SAMN03080610_00206 | Not Available | Positive | 226829 - 227038 | 7347.57 |
| glycerol kinase | SAMN03080610_00207 | Not Available | Positive | 227249 - 228742 | 54597.5 |
| hypothetical protein | SAMN03080610_00208 | Not Available | Positive | 228908 - 229342 | 15134.0 |
| udp-n-acetyl-d-galactosamine dehydrogenase | SAMN03080610_00209 | Not Available | Positive | 229540 - 230817 | 46387.5 |
| mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase | SAMN03080610_00210 | Not Available | Negative | 230738 - 232267 | 54865.9 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN03080610_00211 | Not Available | Negative | 232390 - 233523 | 40907.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
