Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr02300 family protein | SAMN03080610_02585 | Not Available | Positive | 2759259 - 2759696 | 16052.0 |
| Trna-ala | Not Available | Not Available | Positive | 2759865 - 2759940 | Not Available |
| atpase components of abc transporters with duplicated atpase domains | SAMN03080610_02587 | Not Available | Positive | 2760180 - 2761766 | 56819.8 |
| predicted atpase | SAMN03080610_02588 | Not Available | Positive | 2761820 - 2762365 | 20037.2 |
| gntr family transcriptional regulator, histidine utilization repressor | SAMN03080610_02589 | Not Available | Negative | 2762408 - 2763139 | 26683.8 |
| formiminoglutamate deiminase | SAMN03080610_02590 | Not Available | Negative | 2763136 - 2764488 | 48822.1 |
| imidazolonepropionase | SAMN03080610_02591 | Not Available | Positive | 2764548 - 2765765 | 42707.1 |
| histidine ammonia-lyase | SAMN03080610_02592 | Not Available | Positive | 2765762 - 2767303 | 53472.5 |
| formiminoglutamase | SAMN03080610_02593 | Not Available | Positive | 2767307 - 2768110 | 29450.9 |
| urocanate hydratase | SAMN03080610_02594 | Not Available | Positive | 2768115 - 2769785 | 61046.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
