Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prevent-host-death family protein | SAMN03080610_02575 | Not Available | Negative | 2747248 - 2747490 | 8818.53 |
| aspartate/methionine/tyrosine aminotransferase | SAMN03080610_02576 | Not Available | Positive | 2747600 - 2748796 | 42519.0 |
| c4-dicarboxylate transporter, dctm subunit | SAMN03080610_02577 | Not Available | Negative | 2748786 - 2750384 | 56398.4 |
| c4-dicarboxylate transporter, dctq subunit | SAMN03080610_02578 | Not Available | Negative | 2750397 - 2751104 | 26598.4 |
| c4-dicarboxylate-binding protein dctp | SAMN03080610_02579 | Not Available | Negative | 2751217 - 2752221 | 36759.3 |
| trehalose 6-phosphate synthase | SAMN03080610_02580 | Not Available | Negative | 2752551 - 2754095 | 57815.7 |
| trehalose 6-phosphatase | SAMN03080610_02581 | Not Available | Negative | 2754196 - 2754936 | 26185.0 |
| ssu ribosomal protein s1p | SAMN03080610_02582 | Not Available | Negative | 2755109 - 2756827 | 63301.7 |
| cytidylate kinase | SAMN03080610_02583 | Not Available | Negative | 2757015 - 2757674 | 23416.8 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN03080610_02584 | Not Available | Negative | 2757671 - 2759038 | 47434.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
