Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyhydroxyalkanoate synthesis repressor phar | SAMN03080610_02565 | Not Available | Positive | 2738219 - 2738800 | 21950.1 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN03080610_02566 | Not Available | Negative | 2738960 - 2740678 | 62393.6 |
| large subunit ribosomal protein l32 | SAMN03080610_02567 | Not Available | Negative | 2740945 - 2741130 | 6989.51 |
| monofunctional biosynthetic peptidoglycan transglycosylase | SAMN03080610_02568 | Not Available | Negative | 2741264 - 2741953 | 25844.9 |
| farnesyl diphosphate synthase | SAMN03080610_02569 | Not Available | Positive | 2742057 - 2742980 | 32430.8 |
| predicted oxidoreductase | SAMN03080610_02570 | Not Available | Positive | 2743134 - 2744207 | 39159.3 |
| nucleoside-diphosphate-sugar epimerase | SAMN03080610_02571 | Not Available | Negative | 2744300 - 2745283 | 35069.0 |
| acetyltransferase (gnat) domain-containing protein | SAMN03080610_02572 | Not Available | Negative | 2745328 - 2746008 | 25463.3 |
| 2-methylisocitrate lyase, pep mutase family | SAMN03080610_02573 | Not Available | Negative | 2745998 - 2746822 | 28635.6 |
| predicted nucleic acid-binding protein, contains pin domain | SAMN03080610_02574 | Not Available | Negative | 2746838 - 2747251 | 15282.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
