Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN03080610_02535 | Not Available | Negative | 2710149 - 2710460 | 11345.8 |
| dna-binding transcriptional regulator, lysr family | SAMN03080610_02536 | Not Available | Positive | 2710627 - 2711529 | 32301.8 |
| thiol-disulfide isomerase or thioredoxin | SAMN03080610_02537 | Not Available | Negative | 2711590 - 2712276 | 23543.9 |
| argininosuccinate lyase | SAMN03080610_02538 | Not Available | Positive | 2712323 - 2713753 | 51744.7 |
| hypothetical protein | SAMN03080610_02539 | Not Available | Positive | 2713777 - 2714058 | 9921.82 |
| diaminopimelate decarboxylase | SAMN03080610_02540 | Not Available | Positive | 2714099 - 2715373 | 45742.8 |
| tigr02302 family protein | SAMN03080610_02541 | Not Available | Positive | 2715587 - 2718313 | 99383.7 |
| response regulator receiver domain-containing protein | SAMN03080610_02542 | Not Available | Negative | 2718491 - 2718868 | 13753.5 |
| hypoxanthine phosphoribosyltransferase | SAMN03080610_02543 | Not Available | Negative | 2718881 - 2719438 | 20144.3 |
| hypothetical protein | SAMN03080610_02544 | Not Available | Negative | 2719435 - 2720223 | 27839.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
