Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted zn-dependent protease, minimal metalloprotease (mmp)-like domain | SAMN03080610_02525 | Not Available | Positive | 2699323 - 2699721 | 14779.4 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN03080610_02526 | Not Available | Positive | 2699821 - 2700426 | 22305.6 |
| lytic murein transglycosylase | SAMN03080610_02527 | Not Available | Positive | 2700686 - 2701894 | 43751.1 |
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN03080610_02528 | Not Available | Positive | 2702112 - 2704142 | 73718.2 |
| 3-isopropylmalate dehydrogenase | SAMN03080610_02529 | Not Available | Positive | 2704210 - 2705334 | 40150.5 |
| acetyltransferase involved in cellulose biosynthesis, celd/bcsl family | SAMN03080610_02530 | Not Available | Positive | 2705511 - 2706752 | 45235.3 |
| aspartate semialdehyde dehydrogenase | SAMN03080610_02531 | Not Available | Positive | 2706892 - 2707923 | 37442.0 |
| pyroglutamyl-peptidase | SAMN03080610_02532 | Not Available | Positive | 2707923 - 2708678 | 26235.9 |
| uncharacterized conserved protein, duf2147 family | SAMN03080610_02533 | Not Available | Negative | 2708675 - 2709016 | 11924.4 |
| pyridoxine kinase | SAMN03080610_02534 | Not Available | Negative | 2709132 - 2710010 | 30825.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
