Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system atp-binding protein | SAMN03080610_02504 | Not Available | Negative | 2680163 - 2681227 | 39237.7 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN03080610_02505 | Not Available | Negative | 2681299 - 2682330 | 37433.3 |
| dna-binding transcriptional regulator, lysr family | SAMN03080610_02506 | Not Available | Positive | 2682440 - 2683405 | 34870.5 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN03080610_02508 | Not Available | Positive | 2683554 - 2685074 | 53883.5 |
| ssu ribosomal protein s16p | SAMN03080610_02509 | Not Available | Positive | 2685099 - 2685482 | 14343.1 |
| 16s rrna processing protein rimm | SAMN03080610_02510 | Not Available | Positive | 2685516 - 2686133 | 21673.4 |
| quinol monooxygenase ygin | SAMN03080610_02511 | Not Available | Positive | 2686130 - 2686429 | 10973.2 |
| trna (guanine37-n1)-methyltransferase | SAMN03080610_02512 | Not Available | Positive | 2686442 - 2687137 | 24995.1 |
| hypothetical protein | SAMN03080610_02513 | Not Available | Negative | 2687839 - 2688588 | 25936.6 |
| lsu ribosomal protein l19p | SAMN03080610_02514 | Not Available | Positive | 2688911 - 2689375 | 17262.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
