Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonylcarbamoyladenosine trna methylthiotransferase mtab | SAMN03080610_02494 | Not Available | Negative | 2670381 - 2671655 | 47318.2 |
| diaminopimelate epimerase | SAMN03080610_02495 | Not Available | Negative | 2671652 - 2672521 | 31145.9 |
| membrane protein | SAMN03080610_02496 | Not Available | Positive | 2672729 - 2674033 | 47379.7 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN03080610_02497 | Not Available | Negative | 2674182 - 2674526 | 12594.4 |
| sarcosine oxidase subunit beta | SAMN03080610_02498 | Not Available | Negative | 2674567 - 2675688 | 40240.3 |
| nadph-dependent 2,4-dienoyl-coa reductase, sulfur reductase | SAMN03080610_02499 | Not Available | Negative | 2675699 - 2677123 | 49996.5 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | SAMN03080610_02500 | Not Available | Negative | 2677123 - 2677419 | 10610.8 |
| glycine/d-amino acid oxidase | SAMN03080610_02501 | Not Available | Negative | 2677403 - 2678512 | 40019.8 |
| putative spermidine/putrescine transport system permease protein | SAMN03080610_02502 | Not Available | Negative | 2678509 - 2679309 | 28692.7 |
| putative spermidine/putrescine transport system permease protein | SAMN03080610_02503 | Not Available | Negative | 2679306 - 2680166 | 31440.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
