Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase-peroxidase | SAMN03080610_00192 | Not Available | Negative | 209425 - 211626 | 80876.7 |
| hypothetical protein | SAMN03080610_00193 | Not Available | Negative | 211969 - 212199 | 8403.11 |
| isocitrate lyase | SAMN03080610_00194 | Not Available | Negative | 212320 - 213627 | 47721.2 |
| hypothetical protein | SAMN03080610_00195 | Not Available | Positive | 213851 - 215266 | 51641.0 |
| putrescine transport system substrate-binding protein | SAMN03080610_00196 | Not Available | Positive | 215419 - 216513 | 40634.8 |
| putrescine transport system atp-binding protein | SAMN03080610_00197 | Not Available | Positive | 216574 - 217731 | 43039.9 |
| putrescine transport system permease protein | SAMN03080610_00198 | Not Available | Positive | 217741 - 218634 | 33195.8 |
| putrescine transport system permease protein | SAMN03080610_00199 | Not Available | Positive | 218634 - 219425 | 28465.6 |
| uncharacterized protein involved in outer membrane biogenesis | SAMN03080610_00200 | Not Available | Negative | 219446 - 221191 | 62004.1 |
| acetoacetyl-coa synthetase | SAMN03080610_00201 | Not Available | Positive | 221320 - 223278 | 71761.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
