Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyisobutyrate dehydrogenase | SAMN03080610_02474 | Not Available | Negative | 2650513 - 2651394 | 30233.6 |
| lysr family transcriptional regulator, glycine cleavage system transcriptional activator | SAMN03080610_02475 | Not Available | Negative | 2651567 - 2652508 | 34390.2 |
| hypothetical protein | SAMN03080610_02476 | Not Available | Positive | 2652600 - 2652794 | 7470.3 |
| 2'-5' rna ligase | SAMN03080610_02477 | Not Available | Negative | 2652836 - 2653372 | 19514.4 |
| protein of unknown function | SAMN03080610_02478 | Not Available | Positive | 2653852 - 2654298 | 16061.3 |
| phosphinothricin acetyltransferase | SAMN03080610_02479 | Not Available | Negative | 2654339 - 2654914 | 20839.8 |
| hypothetical protein | SAMN03080610_02480 | Not Available | Negative | 2655019 - 2655789 | 27463.7 |
| putative abc transport system permease protein | SAMN03080610_02481 | Not Available | Negative | 2655932 - 2658517 | 91129.3 |
| putative abc transport system atp-binding protein | SAMN03080610_02482 | Not Available | Negative | 2658525 - 2659250 | 25634.8 |
| acyl-coa thioesterase-1 | SAMN03080610_02483 | Not Available | Positive | 2659385 - 2660059 | 23500.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
