Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s18 acetylase rimi | SAMN03080610_02464 | Not Available | Negative | 2640388 - 2640897 | 19122.2 |
| gtp-binding protein | SAMN03080610_02465 | Not Available | Negative | 2640948 - 2642801 | 67222.0 |
| tade-like protein | SAMN03080610_02466 | Not Available | Positive | 2643055 - 2643642 | 21391.2 |
| tade-like protein | SAMN03080610_02467 | Not Available | Positive | 2643642 - 2644259 | 22671.5 |
| flp pilus assembly protein tadg | SAMN03080610_02468 | Not Available | Positive | 2644259 - 2645794 | 56028.8 |
| zn-dependent protease (includes spoivfb) | SAMN03080610_02469 | Not Available | Negative | 2645883 - 2647031 | 40002.4 |
| argininosuccinate synthase | SAMN03080610_02470 | Not Available | Negative | 2647085 - 2648305 | 45345.2 |
| membrane-associated enzyme, pap2 (acid phosphatase) superfamily | SAMN03080610_02471 | Not Available | Negative | 2648419 - 2649246 | 30250.0 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN03080610_02472 | Not Available | Positive | 2649271 - 2649912 | 22637.4 |
| protein n-acetyltransferase, rimj/riml family | SAMN03080610_02473 | Not Available | Positive | 2649932 - 2650516 | 22226.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
