Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain-containing protein | SAMN03080610_02454 | Not Available | Positive | 2630973 - 2631749 | 28340.5 |
| pas domain s-box-containing protein | SAMN03080610_02455 | Not Available | Negative | 2631875 - 2634346 | 90827.9 |
| glycine betaine/proline transport system substrate-binding protein | SAMN03080610_02456 | Not Available | Negative | 2634446 - 2635408 | 34740.1 |
| transcriptional regulator, tetr family | SAMN03080610_02457 | Not Available | Positive | 2635596 - 2636186 | 21423.2 |
| choline dehydrogenase | SAMN03080610_02458 | Not Available | Positive | 2636179 - 2637864 | 60953.4 |
| hypothetical protein | SAMN03080610_02459 | Not Available | Positive | 2638107 - 2638319 | 7734.41 |
| yggt family protein | SAMN03080610_02460 | Not Available | Positive | 2638446 - 2638736 | 11126.2 |
| hypothetical protein | SAMN03080610_02461 | Not Available | Positive | 2638891 - 2639757 | 33825.6 |
| hypothetical protein | SAMN03080610_02462 | Not Available | Negative | 2639802 - 2639951 | 5563.11 |
| hypothetical protein | SAMN03080610_02463 | Not Available | Positive | 2640065 - 2640373 | 10476.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
