Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrochelatase | SAMN03080610_02444 | Not Available | Negative | 2619846 - 2620925 | 40925.7 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family | SAMN03080610_02445 | Not Available | Positive | 2621116 - 2622651 | 54200.1 |
| Trna-ala | Not Available | Not Available | Positive | 2622746 - 2622821 | Not Available |
| hypothetical protein | SAMN03080610_02447 | Not Available | Positive | 2622942 - 2623568 | 23719.2 |
| quinoprotein glucose dehydrogenase | SAMN03080610_02448 | Not Available | Negative | 2623653 - 2626070 | 86617.9 |
| glycosyltransferase, gt2 family | SAMN03080610_02449 | Not Available | Positive | 2626268 - 2627338 | 38612.3 |
| dna-binding transcriptional regulator, gntr family | SAMN03080610_02450 | Not Available | Positive | 2627817 - 2628842 | 38723.5 |
| dna-binding transcriptional regulator, marr family | SAMN03080610_02451 | Not Available | Positive | 2629014 - 2629562 | 19955.2 |
| hypothetical protein | SAMN03080610_02452 | Not Available | Positive | 2629671 - 2629919 | 8531.72 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN03080610_02453 | Not Available | Negative | 2630157 - 2630726 | 21401.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
