Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high-affinity nickel-transport protein | SAMN03080610_02413 | Not Available | Positive | 2585465 - 2586577 | 37735.1 |
| putative glutamine amidotransferase | SAMN03080610_02414 | Not Available | Negative | 2586596 - 2587375 | 28362.4 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN03080610_02415 | Not Available | Positive | 2587545 - 2588636 | 39260.3 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN03080610_02416 | Not Available | Positive | 2588799 - 2589341 | 19993.0 |
| trap transporter, dctm subunit | SAMN03080610_02417 | Not Available | Positive | 2589393 - 2591009 | 57307.2 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN03080610_02418 | Not Available | Positive | 2591037 - 2591813 | 26706.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN03080610_02419 | Not Available | Positive | 2592019 - 2593629 | 59652.3 |
| hypothetical protein | SAMN03080610_02420 | Not Available | Negative | 2593731 - 2593958 | 8367.53 |
| protein of unknown function | SAMN03080610_02421 | Not Available | Positive | 2594394 - 2595692 | 45274.1 |
| Trna-val | Not Available | Not Available | Positive | 2595750 - 2595824 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
