Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a 3-o-deacylase (pagl) | SAMN03080610_02403 | Not Available | Negative | 2576556 - 2577164 | 21833.6 |
| hypoxia induced protein conserved region | SAMN03080610_02404 | Not Available | Negative | 2577311 - 2577490 | 6539.42 |
| short-chain dehydrogenase | SAMN03080610_02405 | Not Available | Negative | 2577588 - 2578427 | 30198.2 |
| hypothetical protein | SAMN03080610_02406 | Not Available | Positive | 2578618 - 2579574 | 33591.3 |
| glutamyl-q trna(asp) synthetase | SAMN03080610_02407 | Not Available | Negative | 2579609 - 2580517 | 33120.4 |
| threonine/homoserine efflux transporter rhta | SAMN03080610_02408 | Not Available | Negative | 2580501 - 2581421 | 33204.8 |
| creatinine amidohydrolase | SAMN03080610_02409 | Not Available | Positive | 2581592 - 2582386 | 27832.4 |
| hypothetical protein | SAMN03080610_02410 | Not Available | Positive | 2582504 - 2583457 | 32990.2 |
| leucine dehydrogenase | SAMN03080610_02411 | Not Available | Negative | 2583504 - 2584583 | 37198.2 |
| abc-type uncharacterized transport system, substrate-binding protein | SAMN03080610_02412 | Not Available | Positive | 2584815 - 2585465 | 23078.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
