Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanine deaminase | SAMN03080610_00182 | Not Available | Positive | 199077 - 200417 | 48372.0 |
| protein of unknown function | SAMN03080610_00183 | Not Available | Negative | 200414 - 200824 | 14965.4 |
| gamma-glutamylputrescine oxidase | SAMN03080610_00184 | Not Available | Negative | 200960 - 202234 | 45672.5 |
| l-glutamine synthetase | SAMN03080610_00185 | Not Available | Negative | 202258 - 203673 | 52609.2 |
| outer membrane scaffolding protein for murein synthesis, mipa/ompv family | SAMN03080610_00186 | Not Available | Negative | 203757 - 204647 | 31170.4 |
| abc-2 type transport system permease protein | SAMN03080610_00187 | Not Available | Negative | 204770 - 205903 | 40948.5 |
| abc-2 type transport system atp-binding protein | SAMN03080610_00188 | Not Available | Negative | 205905 - 206894 | 35503.6 |
| hlyd family secretion protein | SAMN03080610_00189 | Not Available | Negative | 206891 - 207871 | 35166.8 |
| transcriptional regulator, tetr family | SAMN03080610_00190 | Not Available | Negative | 207873 - 208709 | 30288.8 |
| predicted dna-binding protein, mmcq/yjbr family | SAMN03080610_00191 | Not Available | Positive | 208923 - 209288 | 13564.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
