Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN03080610_02373 | Not Available | Negative | 2551553 - 2553085 | 54589.9 |
| heat shock protein htpx | SAMN03080610_02374 | Not Available | Negative | 2553370 - 2554464 | 37741.2 |
| methyl-accepting chemotaxis protein | SAMN03080610_02375 | Not Available | Positive | 2554888 - 2556951 | 72676.0 |
| hypothetical protein | SAMN03080610_02376 | Not Available | Positive | 2557070 - 2557312 | 8807.06 |
| hypothetical protein | SAMN03080610_02377 | Not Available | Negative | 2557334 - 2557783 | 16013.0 |
| protein of unknown function | SAMN03080610_02378 | Not Available | Negative | 2557821 - 2558084 | 9799.76 |
| endonuclease yncb, thermonuclease family | SAMN03080610_02379 | Not Available | Positive | 2558211 - 2558669 | 16249.7 |
| putative membrane protein | SAMN03080610_02380 | Not Available | Negative | 2558777 - 2559469 | 24617.6 |
| uncharacterized protein | SAMN03080610_02381 | Not Available | Negative | 2559479 - 2560222 | 25730.0 |
| lema protein | SAMN03080610_02382 | Not Available | Negative | 2560241 - 2560936 | 25271.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
