Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n6-l-threonylcarbamoyladenine synthase | SAMN03080610_02363 | Not Available | Positive | 2536774 - 2537868 | 37349.0 |
| glycerol-3-phosphate dehydrogenase (nad(p)+) | SAMN03080610_02364 | Not Available | Positive | 2537868 - 2538872 | 34042.0 |
| predicted rna-binding protein, contains pua-like domain | SAMN03080610_02365 | Not Available | Positive | 2538915 - 2539352 | 16319.3 |
| protein of unknown function | SAMN03080610_02366 | Not Available | Positive | 2539419 - 2539835 | 14776.3 |
| protein of unknown function | SAMN03080610_02367 | Not Available | Positive | 2539872 - 2540285 | 14279.9 |
| acetyl-coenzyme a synthetase | SAMN03080610_02368 | Not Available | Positive | 2540433 - 2542391 | 72603.5 |
| l,d-transpeptidase catalytic domain | SAMN03080610_02369 | Not Available | Positive | 2542551 - 2543057 | 18470.8 |
| glutamate dehydrogenase | SAMN03080610_02370 | Not Available | Positive | 2543259 - 2548169 | 181196.0 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolase | SAMN03080610_02371 | Not Available | Negative | 2548141 - 2549745 | 55641.5 |
| uncharacterized conserved protein, heparinase superfamily | SAMN03080610_02372 | Not Available | Negative | 2549798 - 2551471 | 60807.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
