Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxygluconokinase | SAMN03080610_02333 | Not Available | Positive | 2502434 - 2503345 | 32866.1 |
| cytochrome c-type biogenesis protein | SAMN03080610_02334 | Not Available | Negative | 2503376 - 2504113 | 25965.6 |
| transcriptional regulator, arsr family | SAMN03080610_02335 | Not Available | Positive | 2504308 - 2504694 | 14061.8 |
| nitt/taut family transport system atp-binding protein | SAMN03080610_02336 | Not Available | Negative | 2504616 - 2505368 | 27283.9 |
| glucose-6-phosphate 1-dehydrogenase | SAMN03080610_02337 | Not Available | Positive | 2505463 - 2506995 | 57650.4 |
| 6-phosphogluconolactonase | SAMN03080610_02338 | Not Available | Positive | 2506995 - 2507693 | 25209.1 |
| 6-phosphogluconate dehydratase | SAMN03080610_02339 | Not Available | Positive | 2507709 - 2509550 | 64179.7 |
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN03080610_02340 | Not Available | Positive | 2509676 - 2510317 | 22351.9 |
| glucose-6-phosphate isomerase | SAMN03080610_02341 | Not Available | Positive | 2510373 - 2512010 | 59626.2 |
| hydroxypyruvate isomerase | SAMN03080610_02342 | Not Available | Negative | 2511989 - 2512771 | 28512.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
