Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts iia-like nitrogen-regulatory protein ptsn | SAMN03080610_02323 | Not Available | Positive | 2488575 - 2489045 | 16738.2 |
| hypothetical protein | SAMN03080610_02324 | Not Available | Negative | 2489092 - 2489346 | 8808.3 |
| autotransporter secretion outer membrane protein tama | SAMN03080610_02325 | Not Available | Positive | 2489747 - 2491666 | 69752.1 |
| autotransporter secretion inner membrane protein tamb | SAMN03080610_02326 | Not Available | Positive | 2491666 - 2496291 | 156823.0 |
| uroporphyrin-iii c-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase | SAMN03080610_02327 | Not Available | Positive | 2496434 - 2497861 | 49941.9 |
| protein of unknown function | SAMN03080610_02328 | Not Available | Positive | 2497858 - 2498181 | 11345.6 |
| sulfite reductase (nadph) hemoprotein beta-component | SAMN03080610_02329 | Not Available | Positive | 2498216 - 2499874 | 61730.7 |
| phosphoadenosine phosphosulfate reductase | SAMN03080610_02330 | Not Available | Positive | 2499861 - 2500604 | 27593.8 |
| uncharacterized conserved protein, duf934 family | SAMN03080610_02331 | Not Available | Positive | 2500660 - 2501190 | 19193.1 |
| hypothetical protein | SAMN03080610_02332 | Not Available | Negative | 2501199 - 2502353 | 40677.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
