Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-coa synthetase (adp-forming) beta subunit | SAMN03080610_02303 | Not Available | Positive | 2465959 - 2467152 | 42001.8 |
| hypothetical protein | SAMN03080610_02304 | Not Available | Positive | 2467156 - 2467365 | 7897.0 |
| succinyl-coa synthetase alpha subunit | SAMN03080610_02305 | Not Available | Positive | 2467365 - 2468273 | 31088.7 |
| 2-oxoglutarate dehydrogenase e1 component | SAMN03080610_02306 | Not Available | Positive | 2468500 - 2471472 | 112518.0 |
| 2-oxoglutarate dehydrogenase e2 component | SAMN03080610_02307 | Not Available | Positive | 2471535 - 2473091 | 54676.2 |
| uncharacterized conserved protein, mapeg superfamily | SAMN03080610_02308 | Not Available | Positive | 2473113 - 2473526 | 14910.5 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN03080610_02309 | Not Available | Positive | 2473568 - 2474182 | 21938.8 |
| dihydrolipoamide dehydrogenase | SAMN03080610_02310 | Not Available | Positive | 2474247 - 2475650 | 49519.9 |
| hypothetical protein | SAMN03080610_02311 | Not Available | Negative | 2475817 - 2476062 | 8243.8 |
| integrase/recombinase xerc | SAMN03080610_02312 | Not Available | Negative | 2476211 - 2477197 | 35483.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
