Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1a | SAMN03080610_02283 | Not Available | Negative | 2442548 - 2444977 | 89193.8 |
| n-acetylmuramoyl-l-alanine amidase | SAMN03080610_02284 | Not Available | Negative | 2445126 - 2446340 | 43932.7 |
| ribonuclease e | SAMN03080610_02285 | Not Available | Positive | 2446817 - 2449540 | 100043.0 |
| transposase dde domain-containing protein | SAMN03080610_02286 | Not Available | Negative | 2449703 - 2449946 | 9078.95 |
| transposase dde domain-containing protein | SAMN03080610_02287 | Not Available | Positive | 2449947 - 2450180 | 8761.64 |
| dna-binding transcriptional regulator, lysr family | SAMN03080610_02288 | Not Available | Negative | 2450347 - 2451255 | 32879.5 |
| glucans biosynthesis protein | SAMN03080610_02289 | Not Available | Negative | 2451565 - 2453154 | 59105.8 |
| glyoxylase, beta-lactamase superfamily ii | SAMN03080610_02290 | Not Available | Negative | 2453354 - 2454232 | 31690.6 |
| acetolactate synthase-1/2/3 large subunit | SAMN03080610_02291 | Not Available | Negative | 2454257 - 2455942 | 60682.5 |
| succinate dehydrogenase subunit b | SAMN03080610_02292 | Not Available | Positive | 2456108 - 2456884 | 29530.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
