Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacteriophytochrome (light-regulated signal transduction histidine kinase) | SAMN03080610_02273 | Not Available | Positive | 2427746 - 2429980 | 81245.1 |
| two component transcriptional regulator, luxr family | SAMN03080610_02274 | Not Available | Positive | 2429973 - 2430578 | 22036.9 |
| hypothetical protein | SAMN03080610_02275 | Not Available | Positive | 2430746 - 2430964 | 7782.35 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN03080610_02276 | Not Available | Negative | 2431020 - 2433323 | 84274.4 |
| anhydro-n-acetylmuramic acid kinase | SAMN03080610_02277 | Not Available | Negative | 2433384 - 2434499 | 38921.4 |
| tyrosyl-trna synthetase | SAMN03080610_02278 | Not Available | Positive | 2434568 - 2435830 | 46530.6 |
| protein of unknown function | SAMN03080610_02279 | Not Available | Negative | 2435886 - 2439209 | 117202.0 |
| peroxiredoxin q/bcp | SAMN03080610_02280 | Not Available | Positive | 2439335 - 2439811 | 17201.4 |
| peptidase family m23 | SAMN03080610_02281 | Not Available | Positive | 2439913 - 2441265 | 48724.9 |
| peptide chain release factor 2 | SAMN03080610_02282 | Not Available | Negative | 2441336 - 2442301 | 35857.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
