Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent lon protease | SAMN03080610_02253 | Not Available | Negative | 2401850 - 2404279 | 90037.9 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN03080610_02254 | Not Available | Negative | 2404475 - 2405755 | 46449.7 |
| atp-dependent clp protease, protease subunit | SAMN03080610_02255 | Not Available | Negative | 2405904 - 2406536 | 23658.7 |
| trigger factor | SAMN03080610_02256 | Not Available | Negative | 2406730 - 2408109 | 52094.0 |
| Trna-leu | Not Available | Not Available | Positive | 2408199 - 2408283 | Not Available |
| yjef c-terminal region, hydroxyethylthiazole kinase-related/yjef n-terminal region | SAMN03080610_02258 | Not Available | Negative | 2408521 - 2410038 | 52250.0 |
| nitrogen regulatory protein p-ii family | SAMN03080610_02259 | Not Available | Positive | 2410229 - 2410567 | 12294.9 |
| glutamine synthetase | SAMN03080610_02260 | Not Available | Positive | 2410636 - 2412045 | 52473.1 |
| topoisomerase-4 subunit b | SAMN03080610_02261 | Not Available | Positive | 2412568 - 2414607 | 74989.1 |
| outer membrane immunogenic protein | SAMN03080610_02262 | Not Available | Negative | 2414984 - 2415712 | 25863.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
