Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-3 subunit alpha | SAMN03080610_02223 | Not Available | Negative | 2369602 - 2373057 | 127186.0 |
| uncharacterized conserved protein | SAMN03080610_02224 | Not Available | Positive | 2373265 - 2374479 | 42499.7 |
| lipoprotein-releasing system atp-binding protein | SAMN03080610_02225 | Not Available | Negative | 2375203 - 2375904 | 25404.6 |
| lipoprotein-releasing system permease protein | SAMN03080610_02226 | Not Available | Negative | 2375901 - 2377235 | 47621.2 |
| prolyl-trna synthetase | SAMN03080610_02227 | Not Available | Negative | 2377241 - 2378566 | 49310.0 |
| predicted secreted protein | SAMN03080610_02228 | Not Available | Negative | 2378934 - 2379185 | 9168.42 |
| methylmalonyl-coa epimerase | SAMN03080610_02229 | Not Available | Negative | 2379189 - 2379593 | 14332.3 |
| ribonuclease j | SAMN03080610_02230 | Not Available | Negative | 2379602 - 2381284 | 59868.0 |
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN03080610_02231 | Not Available | Negative | 2381287 - 2382111 | 28314.0 |
| nadh dehydrogenase subunit n | SAMN03080610_02232 | Not Available | Negative | 2382114 - 2383550 | 50789.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
