Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | SAMN03080610_02213 | Not Available | Negative | 2358046 - 2359101 | 36414.7 |
| beta-barrel assembly machine subunit bama | SAMN03080610_02214 | Not Available | Negative | 2359142 - 2361664 | 92979.2 |
| regulator of sigma e protease | SAMN03080610_02215 | Not Available | Negative | 2361665 - 2362798 | 40498.4 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN03080610_02216 | Not Available | Negative | 2362869 - 2364050 | 41679.1 |
| phosphatidate cytidylyltransferase | SAMN03080610_02217 | Not Available | Negative | 2364052 - 2364936 | 30801.2 |
| undecaprenyl diphosphate synthase | SAMN03080610_02218 | Not Available | Negative | 2364929 - 2365684 | 28348.8 |
| ribosome recycling factor | SAMN03080610_02219 | Not Available | Negative | 2365834 - 2366394 | 20654.8 |
| uridylate kinase | SAMN03080610_02220 | Not Available | Negative | 2366391 - 2367140 | 26525.1 |
| translation elongation factor ts (ef-ts) | SAMN03080610_02221 | Not Available | Negative | 2367227 - 2368153 | 31886.1 |
| ssu ribosomal protein s2p | SAMN03080610_02222 | Not Available | Negative | 2368185 - 2369342 | 41279.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
