Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate acyltransferase plsy | SAMN03080610_02153 | Not Available | Positive | 2298116 - 2298730 | 21774.0 |
| dna processing protein | SAMN03080610_02154 | Not Available | Positive | 2298727 - 2299860 | 40553.0 |
| hypothetical protein | SAMN03080610_02155 | Not Available | Negative | 2299888 - 2300088 | 7833.13 |
| dna topoisomerase-1 | SAMN03080610_02156 | Not Available | Positive | 2300267 - 2302900 | 96753.0 |
| ribonuclease r | SAMN03080610_02157 | Not Available | Positive | 2302903 - 2305200 | 84011.3 |
| uncharacterized conserved protein, duf983 family | SAMN03080610_02158 | Not Available | Positive | 2305215 - 2305625 | 14890.5 |
| nudix domain-containing protein | SAMN03080610_02159 | Not Available | Positive | 2305622 - 2306362 | 27137.5 |
| cyanate permease | SAMN03080610_02160 | Not Available | Positive | 2306373 - 2307557 | 41115.4 |
| large subunit ribosomal protein l33 | SAMN03080610_02161 | Not Available | Positive | 2307620 - 2307787 | 6374.03 |
| response regulator receiver modulated diguanylate cyclase | SAMN03080610_02162 | Not Available | Negative | 2308251 - 2309615 | 50274.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
