Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b pre-mrna-processing protein 3 | SAMN03080610_02123 | Not Available | Negative | 2265833 - 2266381 | 20127.9 |
| outer membrane protein assembly factor bame, lipoprotein component of the bamabcde complex | SAMN03080610_02124 | Not Available | Positive | 2266492 - 2266932 | 15642.7 |
| hypothetical protein | SAMN03080610_02125 | Not Available | Positive | 2267395 - 2268168 | 29322.6 |
| k(+)-stimulated pyrophosphate-energized sodium pump | SAMN03080610_02126 | Not Available | Negative | 2268503 - 2270617 | 72114.6 |
| predicted arabinose efflux permease, mfs family | SAMN03080610_02127 | Not Available | Negative | 2270770 - 2271993 | 42457.2 |
| thiamine-monophosphate kinase | SAMN03080610_02128 | Not Available | Negative | 2271993 - 2272964 | 33793.1 |
| nusb antitermination factor | SAMN03080610_02129 | Not Available | Negative | 2272971 - 2273381 | 15075.2 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN03080610_02130 | Not Available | Negative | 2273461 - 2273907 | 15658.7 |
| riboflavin synthase alpha chain | SAMN03080610_02131 | Not Available | Negative | 2273926 - 2274525 | 21074.1 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | SAMN03080610_02132 | Not Available | Negative | 2274525 - 2275628 | 38746.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
