Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein involved in exopolysaccharide biosynthesis | SAMN03080610_02113 | Not Available | Negative | 2255869 - 2257950 | 74830.0 |
| polysaccharide export outer membrane protein | SAMN03080610_02114 | Not Available | Positive | 2258103 - 2258663 | 20114.3 |
| undecaprenyl-phosphate glucose phosphotransferase | SAMN03080610_02115 | Not Available | Positive | 2258756 - 2260276 | 56578.3 |
| o-antigen ligase like membrane protein | SAMN03080610_02116 | Not Available | Negative | 2260481 - 2261761 | 47839.3 |
| Trna-pro | Not Available | Not Available | Positive | 2261959 - 2262035 | Not Available |
| merr hth family regulatory protein | SAMN03080610_02118 | Not Available | Negative | 2262113 - 2262643 | 19903.6 |
| integration host factor subunit alpha | SAMN03080610_02119 | Not Available | Negative | 2262640 - 2263056 | 14774.6 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN03080610_02120 | Not Available | Negative | 2263141 - 2264112 | 34394.7 |
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN03080610_02121 | Not Available | Negative | 2264109 - 2265182 | 38301.4 |
| uncharacterized acr, cog1399 | SAMN03080610_02122 | Not Available | Negative | 2265274 - 2265831 | 20015.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
