Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03080610_00152 | Not Available | Positive | 171788 - 172024 | 8170.75 |
| hypothetical protein | SAMN03080610_00153 | Not Available | Positive | 172360 - 172803 | 16203.3 |
| hypothetical protein | SAMN03080610_00154 | Not Available | Negative | 172866 - 173063 | 7091.32 |
| septum formation protein | SAMN03080610_00155 | Not Available | Negative | 173060 - 173698 | 23146.2 |
| bacterial translation initiation factor 1 (bif-1) | SAMN03080610_00156 | Not Available | Negative | 173754 - 173972 | 8344.27 |
| protein-tyrosine-phosphatase | SAMN03080610_00157 | Not Available | Negative | 174060 - 174449 | 14366.2 |
| uncharacterized protein, upf0262 family | SAMN03080610_00158 | Not Available | Negative | 174515 - 174994 | 18194.8 |
| histidinol dehydrogenase | SAMN03080610_00159 | Not Available | Negative | 175007 - 176299 | 45828.9 |
| protein of unknown function | SAMN03080610_00160 | Not Available | Negative | 176318 - 176770 | 16843.4 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMN03080610_00161 | Not Available | Negative | 176943 - 178232 | 45465.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
