Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp diphosphatase | SAMN03080610_02053 | Not Available | Positive | 2189749 - 2190582 | 30872.3 |
| gtp-binding protein hflx | SAMN03080610_02054 | Not Available | Negative | 2190593 - 2191978 | 50960.9 |
| host factor-i protein | SAMN03080610_02055 | Not Available | Negative | 2191984 - 2192226 | 9167.04 |
| d-alanine transaminase | SAMN03080610_02056 | Not Available | Negative | 2192330 - 2193193 | 31741.2 |
| trk system potassium uptake protein trka | SAMN03080610_02057 | Not Available | Negative | 2193315 - 2194691 | 50085.0 |
| two-component system, ntrc family, nitrogen regulation response regulator ntrx | SAMN03080610_02058 | Not Available | Negative | 2194732 - 2196093 | 49721.9 |
| pas/pac sensor signal transduction histidine kinase | SAMN03080610_02059 | Not Available | Negative | 2196093 - 2198372 | 82557.5 |
| nitrogen metabolism transcriptional regulator, ntrc, fis family | SAMN03080610_02060 | Not Available | Negative | 2198469 - 2199908 | 53815.9 |
| two-component system, ntrc family, nitrogen regulation sensor histidine kinase glnl | SAMN03080610_02061 | Not Available | Negative | 2199905 - 2201032 | 40760.0 |
| pp_02038 | SAMN03080610_02062 | Not Available | Negative | 2201032 - 2202063 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
