Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 2179756 - 2179845 | Not Available |
| rare lipoprotein a | SAMN03080610_02044 | Not Available | Positive | 2180227 - 2181231 | 35612.2 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN03080610_02045 | Not Available | Positive | 2181288 - 2182463 | 42816.7 |
| dtmp kinase | SAMN03080610_02046 | Not Available | Positive | 2182454 - 2183104 | 23348.0 |
| dna polymerase-3 subunit delta' | SAMN03080610_02047 | Not Available | Positive | 2183105 - 2184196 | 40191.6 |
| methionyl-trna synthetase | SAMN03080610_02048 | Not Available | Positive | 2184212 - 2185774 | 58195.9 |
| tatd dnase family protein | SAMN03080610_02049 | Not Available | Positive | 2185774 - 2186553 | 28521.7 |
| phosphoribosyl 1,2-cyclic phosphate phosphodiesterase | SAMN03080610_02050 | Not Available | Positive | 2186556 - 2187392 | 30622.5 |
| trk system potassium uptake protein trka | SAMN03080610_02051 | Not Available | Positive | 2187506 - 2188180 | 24523.4 |
| trk system potassium uptake protein trkh | SAMN03080610_02052 | Not Available | Positive | 2188180 - 2189529 | 48656.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
