Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase | SAMN03080610_02033 | Not Available | Positive | 2165962 - 2166933 | 34379.7 |
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN03080610_02034 | Not Available | Negative | 2166908 - 2168128 | 44410.1 |
| alanine or glycine:cation symporter, agcs family | SAMN03080610_02035 | Not Available | Positive | 2168477 - 2169823 | 46434.1 |
| predicted integral membrane protein | SAMN03080610_02036 | Not Available | Positive | 2169992 - 2170552 | 19942.9 |
| restriction system protein | SAMN03080610_02037 | Not Available | Positive | 2170911 - 2171930 | 37623.6 |
| hypothetical protein | SAMN03080610_02038 | Not Available | Positive | 2171937 - 2172545 | 22408.5 |
| type i restriction enzyme m protein | SAMN03080610_02039 | Not Available | Positive | 2172629 - 2174158 | 57543.6 |
| type i restriction enzyme, s subunit | SAMN03080610_02040 | Not Available | Positive | 2174155 - 2175345 | 43028.8 |
| hypothetical protein | SAMN03080610_02041 | Not Available | Positive | 2175345 - 2176277 | 34640.7 |
| type i restriction enzyme, r subunit | SAMN03080610_02042 | Not Available | Positive | 2176295 - 2179705 | 127476.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
