Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system permease protein | SAMN03080610_02023 | Not Available | Positive | 2152157 - 2153008 | 31038.7 |
| hsp20 family protein | SAMN03080610_02024 | Not Available | Negative | 2153106 - 2153603 | 18649.2 |
| membrane fusion protein, multidrug efflux system | SAMN03080610_02025 | Not Available | Positive | 2153819 - 2155072 | 44809.4 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN03080610_02026 | Not Available | Positive | 2155069 - 2156640 | 56168.8 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN03080610_02027 | Not Available | Positive | 2156650 - 2158176 | 53498.6 |
| transcriptional regulator, tetr family | SAMN03080610_02028 | Not Available | Positive | 2158119 - 2158928 | 30009.0 |
| esterase/lipase superfamily enzyme | SAMN03080610_02029 | Not Available | Positive | 2159055 - 2160230 | 42357.5 |
| glycine betaine/l-proline transport atp binding subunit | SAMN03080610_02030 | Not Available | Positive | 2160334 - 2162943 | 92858.9 |
| glycine betaine/proline transport system substrate-binding protein | SAMN03080610_02031 | Not Available | Positive | 2162999 - 2163946 | 34605.4 |
| hypothetical protein | SAMN03080610_02032 | Not Available | Negative | 2164015 - 2165706 | 61348.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
