Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription-repair coupling factor | SAMN03080610_02003 | Not Available | Positive | 2128035 - 2131544 | 128052.0 |
| cu(i)-responsive transcriptional regulator | SAMN03080610_02004 | Not Available | Negative | 2131541 - 2131960 | 15575.7 |
| cation efflux family protein | SAMN03080610_02005 | Not Available | Positive | 2132027 - 2132668 | 22192.1 |
| predicted dithiol-disulfide isomerase, dsba family | SAMN03080610_02006 | Not Available | Negative | 2132704 - 2133387 | 24656.1 |
| peptide/nickel transport system substrate-binding protein | SAMN03080610_02007 | Not Available | Negative | 2133425 - 2135149 | 64951.2 |
| invasion protein ialb, involved in pathogenesis | SAMN03080610_02008 | Not Available | Positive | 2135449 - 2136090 | 23692.5 |
| manganese transport protein | SAMN03080610_02009 | Not Available | Positive | 2136374 - 2137588 | 42685.0 |
| heat shock protein hspq | SAMN03080610_02010 | Not Available | Negative | 2137612 - 2137932 | 12281.2 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN03080610_02011 | Not Available | Negative | 2138008 - 2138850 | 31355.0 |
| hypothetical protein | SAMN03080610_02012 | Not Available | Positive | 2139066 - 2140031 | 33808.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
