Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-peptidoglycan transpeptidase ykud, erfk/ybis/ycfs/ynhg family | SAMN03080610_01953 | Not Available | Negative | 2075419 - 2076075 | 24214.6 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN03080610_01954 | Not Available | Positive | 2076180 - 2076866 | 25149.1 |
| cyclic nucleotide-binding domain-containing protein | SAMN03080610_01955 | Not Available | Positive | 2076876 - 2077349 | 17322.7 |
| exodeoxyribonuclease-3 | SAMN03080610_01956 | Not Available | Negative | 2077371 - 2078174 | 30175.0 |
| outer membrane lipoprotein-sorting protein | SAMN03080610_01957 | Not Available | Negative | 2078472 - 2079119 | 23551.2 |
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN03080610_01958 | Not Available | Negative | 2079205 - 2081697 | 89489.2 |
| ammonium transporter | SAMN03080610_01959 | Not Available | Negative | 2081850 - 2083235 | 48167.9 |
| nitrogen regulatory protein p-ii family | SAMN03080610_01960 | Not Available | Negative | 2083238 - 2083576 | 12097.7 |
| ammonium transporter, amt family | SAMN03080610_01961 | Not Available | Negative | 2083937 - 2085244 | 44586.9 |
| nitrogen regulatory protein p-ii family | SAMN03080610_01962 | Not Available | Negative | 2085277 - 2085615 | 12004.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
