Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0716 protein fxsa | SAMN03080610_01933 | Not Available | Positive | 2054476 - 2054964 | 17766.9 |
| protein translocase subunit secb | SAMN03080610_01934 | Not Available | Positive | 2055154 - 2055666 | 18218.5 |
| dna polymerase-3 subunit epsilon | SAMN03080610_01935 | Not Available | Negative | 2055639 - 2056385 | 27163.4 |
| dephospho-coa kinase | SAMN03080610_01936 | Not Available | Negative | 2056491 - 2057051 | 20490.6 |
| shikimate dehydrogenase | SAMN03080610_01937 | Not Available | Negative | 2057069 - 2057908 | 29310.0 |
| septum formation protein | SAMN03080610_01938 | Not Available | Negative | 2057910 - 2058506 | 20838.2 |
| hypothetical protein | SAMN03080610_01939 | Not Available | Negative | 2058503 - 2059336 | 30382.8 |
| uroporphyrinogen decarboxylase | SAMN03080610_01940 | Not Available | Positive | 2059790 - 2060749 | 34662.8 |
| putative membrane protein | SAMN03080610_01941 | Not Available | Positive | 2060753 - 2061220 | 18076.6 |
| transcription termination factor rho | SAMN03080610_01942 | Not Available | Positive | 2061393 - 2062658 | 47002.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
